Research workbench
Crystal structure of trmo from P. areuginosa
Analyse Crystal structure of trmo from P. areuginosa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7BTU
- Type
- protein
- Length
- 428 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative tRNA (ADENINE(37)-N6)-methyltransferase
- UniProt
- A0A080VNW8
- Pockets
- 2 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 21% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative tRNA (ADENINE(37)-N6)-methyltransferase | protein | 213 | 20% helix, 35% strand | A0A080VNW8 |
| B | Putative tRNA (ADENINE(37)-N6)-methyltransferase | protein | 215 | 21% helix, 36% strand | A0A080VNW8 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.71 | 0.82 | 50 | empty |
| 2 | 421 | 0.65 | 0.78 | 45 | empty |
Interfaces
1 interface between chains.
- A–B · 3207 Ų buried · 54 hydrogen bonds · protein-protein
Compared structures
- 7BTU · Crystal structure of TrmO from P. areuginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A080VNW8
- Elsewhere: RCSB PDB 7BTU · PDBe 7BTU · UniProt A0A080VNW8
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