Research workbench
Architecture of curli complex
Analyse Architecture of curli complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7BRM
- Type
- protein
- Length
- 2,619 residues
- Chains
- 18
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Curli production ASSEMBLY/TRANSPORT protein csgg; Csgf
- UniProt
- A0A4V3YU48
- Pockets
- 20 · best druggability 0.81
Structure
electron microscopy · 2 distinct chains · 26% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I | Curli production ASSEMBLY/TRANSPORT protein csgg | protein | 257 | 25% helix, 35% strand | A0A4V3YU48 |
| a, b, c, d, e, f, g, h, i | Csgf | protein | 34 | 35% helix, 0% strand | — |
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 974 | 0.81 | 0.83 | 110 | empty |
| 2 | 1141 | 0.79 | 0.81 | 111 | empty |
| 3 | 327 | 0.69 | 0.83 | 45 | empty |
| 4 | 367 | 0.68 | 0.81 | 44 | empty |
| 5 | 346 | 0.66 | 0.81 | 41 | empty |
Interfaces
54 interfaces between chains.
- G–I · 3138 Ų buried · 50 hydrogen bonds · protein-protein
- A–B · 3137 Ų buried · 48 hydrogen bonds · protein-protein
- C–D · 3133 Ų buried · 47 hydrogen bonds · protein-protein
- E–H · 3123 Ų buried · 45 hydrogen bonds · protein-protein
- A–I · 3122 Ų buried · 46 hydrogen bonds · protein-protein
Compared structures
- 7BRM · Architecture of curli complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4V3YU48
- Elsewhere: RCSB PDB 7BRM · PDBe 7BRM · UniProt A0A4V3YU48
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