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A de novo pentameric coiled-coil assembly: cc-TYPE2-(TGLAID)4- W19BRPHE.

Analyse A de novo pentameric coiled-coil assembly: cc-TYPE2-(TGLAID)4- W19BRPHE. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7BAV
Type: protein
Length: 150 residues
Chains: 5
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cc-TYPE2-(TGLAID)4-W19BRPHE
Ligands: ACE, NH2

Structure

x-ray diffraction · 1 distinct chain · 90% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E	Cc-TYPE2-(TGLAID)4-W19BRPHE	protein	30	90% helix, 0% strand	—

Ligands and binding sites

ACE · Acetyl group · ligand · 3 copies · chains A, D, C, E
NH2 · Amino group · ion · 2 copies · chains B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

8 interfaces between chains.

B–E · 742 Å² buried · 2 hydrogen bonds · protein-protein
A–B · 732 Å² buried · 2 hydrogen bonds · protein-protein
C–E · 727 Å² buried · 1 hydrogen bond · protein-protein
A–D · 705 Å² buried · 2 hydrogen bonds · protein-protein
C–D · 663 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 5 modified, 3 covalent (nonstandard, covalent ligand).

Compared structures

7BAV · A de novo pentameric coiled-coil assembly: CC-Type2-(TgLaId)4-W19BrPhe. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 7BAV · PDBe 7BAV

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