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Cryo-EM of aedes aegypti TOLL5A dimer bound to SPZ1C

Analyse Cryo-EM of aedes aegypti TOLL5A dimer bound to SPZ1C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7B1B
Type
protein
Length
1,697 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A0A6I8TEX2, Q16J57
Ligands
NAG, BMA

Structure

electron microscopy · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein754—A0A6I8TEX2
D—protein99—Q16J57
P—protein92—Q16J57
B—protein752—A0A6I8TEX2

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 17 copies · chains A, B, D
  • BMA · beta-D-mannopyranose · sugar · 5 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7B1B · Cryo-EM of Aedes Aegypti Toll5A dimer bound to Spz1C · the same entry in another collection · chain A against A, TM-score 1.00

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