Research workbench
Membrane protein structure
Analyse Membrane protein structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7B0K
- Type
- protein
- Length
- 255 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DRUG/METABOLITE transporter (dmt) superfamily permease
- UniProt
- A0A0E7XN74
- Ligands
- CHT
- Pockets
- 2 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DRUG/METABOLITE transporter (dmt) superfamily permease | protein | 255 | 76% helix, 0% strand | A0A0E7XN74 |
Ligands and binding sites
- CHT · Choline ion · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.68 | 0.91 | 25 | empty |
| 2 | 118 | 0.53 | 0.82 | 24 | empty |
Compared structures
- 7B0K · membrane protein structure · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E7XN74
- Elsewhere: RCSB PDB 7B0K · PDBe 7B0K · UniProt A0A0E7XN74
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.