Research workbench
Bacillus subtilis manganese transport regulator (mntr) bound to manganese, ab conformation.
Analyse Bacillus subtilis manganese transport regulator (mntr) bound to manganese, ab… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ON1
- Type
- protein
- Length
- 260 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator mntr
- UniProt
- P54512
- Ligands
- MN
- Pockets
- 1 · best druggability 0.28
Structure
x-ray diffraction · 1 distinct chain · 78% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Transcriptional regulator mntr | protein | 130 | 78% helix, 2% strand | P54512 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.28 | 0.75 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1311 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 1ON1 · Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound To Manganese, AB… · the same entry in another collection · chain A against A, TM-score 1.00
- P54512 · AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator mntr (P54512) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54512
- Elsewhere: RCSB PDB 1ON1 · PDBe 1ON1 · UniProt P54512
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