Research workbench
Sarcin-ricin loop RNA from ecoli with a C2667-2'-OCF3 modification
Analyse Sarcin-ricin loop RNA from ecoli with a C2667-2'-OCF3 modification in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6ZYB
- Type
- RNA
- Length
- 27 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sarcin-ricin loop RNA from ecoli with a C2667-2'-OCF3 modification
- Pockets
- 1 · best druggability 0.24
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sarcin-ricin loop RNA from ecoli with a C2667-2'-OCF3 modification | rna | 27 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.24 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 6ZYB · Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6ZYB · PDBe 6ZYB
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.