Research workbench
Three-dimensional structure of S.AUREUS methicillin-resistance regulating transcriptional repressor meci.
Analyse Three-dimensional structure of S.AUREUS methicillin-resistance regulating… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1OKR
- Type
- protein
- Length
- 242 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Methicillin resistance regulatory protein meci
- UniProt
- P26598
- Ligands
- CL
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 2 distinct chains · 63% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methicillin resistance regulatory protein meci | protein | 120 | 63% helix, 12% strand | P26598 |
| B | Methicillin resistance regulatory protein meci | protein | 122 | 63% helix, 11% strand | P26598 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.44 | 0.76 | 28 | empty |
| 2 | 61 | 0.31 | 0.75 | 14 | empty |
| 3 | 66 | 0.30 | 0.74 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 1966 Ų buried · 24 hydrogen bonds · protein-protein
Compared structures
- 1OKR · Three-dimensional structure of S.aureus methicillin-resistance regulating transcriptional… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26598
- Elsewhere: RCSB PDB 1OKR · PDBe 1OKR · UniProt P26598
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