Research workbench

Nonstructural protein 10 (NSP10) from SARS cov-2

Analyse Nonstructural protein 10 (NSP10) from SARS cov-2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6ZCT
Type: protein
Length: 125 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NSP10
EC: 3.4.19.12, 3.4.22.-, 3.4.22.69
UniProt: P0DTC1
Ligands: ZN
Pockets: 1 · best druggability 0.44

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NSP10 (EC 3.4.19.12, 3.4.22.-, 3.4.22.69)	protein	125	30% helix, 12% strand	P0DTC1

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	115	0.44	0.77	19	empty

Compared structures

6ZCT · Nonstructural protein 10 (nsp10) from SARS CoV-2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DTC1
Elsewhere: RCSB PDB 6ZCT · PDBe 6ZCT · UniProt P0DTC1

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