Research workbench
Rhodospirillum rubrum reduced coot solution structure
Analyse Rhodospirillum rubrum reduced coot solution structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6Y8W
- Type
- protein
- Length
- 140 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Coot
- UniProt
- P72320
- Pockets
- 2 · best druggability 0.45
Structure
solution nmr · 1 distinct chain · 0% helix, 61% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Coot | protein | 70 | 0% helix, 61% strand | P72320 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.45 | 0.79 | 22 | empty |
| 2 | 112 | 0.38 | 0.75 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 960 Ų buried · 22 hydrogen bonds · protein-protein
Compared structures
- 6Y8W · Rhodospirillum rubrum reduced CooT solution structure · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P72320
- Elsewhere: RCSB PDB 6Y8W · PDBe 6Y8W · UniProt P72320
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