Research workbench
Crystal structure of the homospermidine synthase (hss) from pseudomonas aeruginosa in complex with NAD and put
Analyse Crystal structure of the homospermidine synthase (hss) from pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6Y87
- Type
- protein
- Length
- 2,764 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6X2Y9
- Ligands
- NAD, PUT
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 470 | — | Q6X2Y9 |
| B | — | protein | 466 | — | Q6X2Y9 |
| C | — | protein | 454 | — | Q6X2Y9 |
| D | — | protein | 456 | — | Q6X2Y9 |
| E | — | protein | 460 | — | Q6X2Y9 |
| F | — | protein | 458 | — | Q6X2Y9 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 6 copies · chains A, B, C, D, E, F
- PUT · 1,4-diaminobutane · ligand · 3 copies · chains A, C, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y87 · Crystal Structure of the Homospermidine Synthase (HSS) from Pseudomonas aeruginosa in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6X2Y9
- Elsewhere: RCSB PDB 6Y87 · PDBe 6Y87 · UniProt Q6X2Y9
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