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Crystal structure of TLNRD1

Analyse Crystal structure of TLNRD1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6XZ4
Type
protein
Length
608 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Talin rod domain-containing protein 1
UniProt
Q9H1K6
Pockets
3 · best druggability 0.66

Structure

x-ray diffraction · 2 distinct chains · 77% helix, 1% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATalin rod domain-containing protein 1protein30477% helix, 1% strandQ9H1K6
BTalin rod domain-containing protein 1protein30477% helix, 1% strandQ9H1K6

Pockets

3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
15730.660.7764empty
22380.580.7928empty
32510.510.7525empty

Interfaces

1 interface between chains.

  • A–B · 1180 Ų buried · 9 hydrogen bonds · protein-protein

Compared structures

  • 6XZ4 · Crystal structure of TLNRD1 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9H1K6 · AlphaFold monomer V2.0 prediction for talin rod domain-containing protein 1 (Q9H1K6) · a predicted model of the same protein · chain B against A, TM-score 0.95

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