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GCN4-P1 peptide trimer with P-methylphenylalanine residue at position 16 (me-F16)

Analyse GCN4-P1 peptide trimer with P-methylphenylalanine residue at position 16… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6XNE
Type
protein
Length
90 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P03069
Ligands
NA, MG

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein30—P03069
B, C—protein30—P03069

Ligands and binding sites

  • NA · Sodium ion · metal · 6 copies · chains A, B, C
  • MG · Magnesium ion · metal · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6XNE · GCN4-p1 Peptide Trimer with p-methylphenylalanine residue at position 16 (me-F16) · the same entry in another collection · chain A against A, TM-score 1.00
  • P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain A against A, TM-score 0.91

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