Research workbench

Caulobacter crescentus fljk filament

Analyse Caulobacter crescentus fljk filament in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6XL0
Type: protein
Length: 5,420 residues
Chains: 20
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flagellin
UniProt: A0A0H3C7K6
Pockets: 20 · best druggability 0.84

Structure

electron microscopy · 1 distinct chain · 69% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	Flagellin	protein	271	69% helix, 4% strand	A0A0H3C7K6

Pockets

20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1150	0.84	0.85	120	empty
2	1113	0.83	0.84	117	empty
3	990	0.83	0.84	98	empty
4	517	0.80	0.87	82	empty
5	248	0.73	0.87	42	empty

Interfaces

42 interfaces between chains.

J–K · 1788 Å² buried · 11 hydrogen bonds · protein-protein
N–T · 1764 Å² buried · 15 hydrogen bonds · protein-protein
E–F · 1744 Å² buried · 9 hydrogen bonds · protein-protein
J–P · 1732 Å² buried · 15 hydrogen bonds · protein-protein
C–E · 1706 Å² buried · 15 hydrogen bonds · protein-protein

Compared structures

6XL0 · Caulobacter crescentus FljK filament · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3C7K6
Elsewhere: RCSB PDB 6XL0 · PDBe 6XL0 · UniProt A0A0H3C7K6

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