Research workbench

Caulobacter crescentus fljk filament, straightened

Analyse Caulobacter crescentus fljk filament, straightened in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6XKY
Type: protein
Length: 5,420 residues
Chains: 20
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flagellin
UniProt: A0A0H3C7K6
Pockets: 20 · best druggability 0.82

Structure

electron microscopy · 1 distinct chain · 69% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	Flagellin	protein	271	69% helix, 5% strand	A0A0H3C7K6

Pockets

20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	840	0.82	0.84	87	empty
2	745	0.80	0.84	71	empty
3	728	0.80	0.84	71	empty
4	540	0.80	0.86	73	empty
5	763	0.79	0.83	77	empty

Interfaces

42 interfaces between chains.

K–L · 1688 Å² buried · 9 hydrogen bonds · protein-protein
K–N · 1687 Å² buried · 19 hydrogen bonds · protein-protein
D–E · 1673 Å² buried · 17 hydrogen bonds · protein-protein
P–Q · 1673 Å² buried · 17 hydrogen bonds · protein-protein
L–M · 1672 Å² buried · 17 hydrogen bonds · protein-protein

Compared structures

6XKY · Caulobacter crescentus FljK filament, straightened · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3C7K6
Elsewhere: RCSB PDB 6XKY · PDBe 6XKY · UniProt A0A0H3C7K6

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