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Crystal structure of the yeast px-doamin protein GRD19P (sorting NEXIN3) complexed to phosphatidylinosytol-3-phosphate.
Analyse Crystal structure of the yeast px-doamin protein GRD19P (sorting NEXIN3)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1OCS
- Type
- protein
- Length
- 132 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sorting nexin GRD19
- UniProt
- Q08826
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sorting nexin GRD19 | protein | 132 | 38% helix, 21% strand | Q08826 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (artifact).
Compared structures
- 1OCS · Crystal structure of the yeast PX-doamin protein Grd19p (sorting nexin3) complexed to… · the same entry in another collection · chain A against A, TM-score 1.00
- Q08826 · AlphaFold monomer V2.0 prediction for sorting nexin-3 (Q08826) · a predicted model of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08826
- Elsewhere: RCSB PDB 1OCS · PDBe 1OCS · UniProt Q08826
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