Research workbench
Human calcium and integrin binding protein 3 bound to TMC1 residues 303-347
Analyse Human calcium and integrin binding protein 3 bound to TMC1 residues 303-347 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6WUD
- Type
- protein
- Length
- 228 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calcium and integrin-binding family member 3; Transmembrane channel-like protein 1
- UniProt
- Q96Q77, Q8R4P5
- Ligands
- MG
Structure
x-ray diffraction · 2 distinct chains · 59% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calcium and integrin-binding family member 3 | protein | 183 | 56% helix, 2% strand | Q96Q77 |
| B | Transmembrane channel-like protein 1 | protein | 45 | 71% helix, 0% strand | Q8R4P5 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1666 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
- 6WUD · Human Calcium and Integrin Binding Protein 3 Bound to TMC1 Residues 303-347 · the same entry in another collection · chain A against A, TM-score 1.00
- Q96Q77 · AlphaFold monomer V2.0 prediction for calcium and integrin-binding family member 3… · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q8R4P5 · AlphaFold monomer V2.0 prediction for transmembrane channel-like protein 1 (Q8R4P5) · a predicted model of the same protein · chain B against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96Q77
- Every structure of UniProt Q8R4P5
- Elsewhere: RCSB PDB 6WUD · PDBe 6WUD · UniProt Q96Q77 · UniProt Q8R4P5
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