Research workbench
Human SUN2-KASH3 complex
Analyse Human SUN2-KASH3 complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6WME
- Type
- protein
- Length
- 211 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sun domain-containing protein 2; Nesprin-3
- UniProt
- Q9UH99, Q6ZMZ3
- Ligands
- K
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sun domain-containing protein 2 | protein | 195 | 17% helix, 39% strand | Q9UH99 |
| B | Nesprin-3 | protein | 16 | 0% helix, 25% strand | Q6ZMZ3 |
Ligands and binding sites
- K · Potassium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 683 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 6WME · Human Sun2-KASH3 complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UH99 · AlphaFold monomer V2.0 prediction for sun domain-containing protein 2 (Q9UH99) · a predicted model of the same protein · chain A against A, TM-score 0.95
- Q6ZMZ3 · AlphaFold monomer V2.0 prediction for nesprin-3 (Q6ZMZ3) · a predicted model of the same protein · chain B against A, TM-score 0.22
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UH99
- Every structure of UniProt Q6ZMZ3
- Elsewhere: RCSB PDB 6WME · PDBe 6WME · UniProt Q9UH99 · UniProt Q6ZMZ3
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