Research workbench
Crystal structure of ygbl, a putative ALDOLASE/EPIMERASE/DECARBOXYLASE from escherichia COLI
Analyse Crystal structure of ygbl, a putative ALDOLASE/EPIMERASE/DECARBOXYLASE from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6VOP
- Type
- protein
- Length
- 207 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aldolase
- EC
- 4.1.2.17
- UniProt
- J7R4S3
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aldolase (EC 4.1.2.17) | protein | 207 | 39% helix, 17% strand | J7R4S3 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.38 | 0.76 | 22 | empty |
Compared structures
- 6VOP · Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Escherichia… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J7R4S3
- Elsewhere: RCSB PDB 6VOP · PDBe 6VOP · UniProt J7R4S3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.