Research workbench
Structure of GCP6 in the native human gamma-tubulin ring complex
Analyse Structure of GCP6 in the native human gamma-tubulin ring complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6V6C
- Type
- protein
- Length
- 497 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gamma-tubulin complex component 6
- UniProt
- Q96RT7
- Pockets
- 8 · best druggability 0.73
Structure
electron microscopy · 1 distinct chain · 61% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L | Gamma-tubulin complex component 6 | protein | 497 | 61% helix, 0% strand | Q96RT7 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 369 | 0.73 | 0.83 | 38 | empty |
| 2 | 157 | 0.59 | 0.83 | 20 | empty |
| 3 | 61 | 0.52 | 0.86 | 17 | empty |
| 4 | 108 | 0.46 | 0.79 | 15 | empty |
| 5 | 83 | 0.37 | 0.76 | 14 | empty |
Compared structures
- 6V6C · Structure of GCP6 in the native human gamma-tubulin ring complex · the same entry in another collection · chain L against L, TM-score 1.00
- Q96RT7 · AlphaFold monomer V2.0 prediction for gamma-tubulin complex component 6 (Q96RT7) · a predicted model of the same protein · chain L against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96RT7
- Elsewhere: RCSB PDB 6V6C · PDBe 6V6C · UniProt Q96RT7
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