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Crystal structure of an hypothetical protein
Analyse Crystal structure of an hypothetical protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1O65
- Type
- protein
- Length
- 652 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein yiim
- UniProt
- P32157
- Pockets
- 5 · best druggability 0.80
Structure
x-ray diffraction · 3 distinct chains · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein yiim | protein | 218 | 33% helix, 25% strand | P32157 |
| B | Hypothetical protein yiim | protein | 217 | 31% helix, 24% strand | P32157 |
| C | Hypothetical protein yiim | protein | 217 | 35% helix, 24% strand | P32157 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 834 | 0.80 | 0.83 | 99 | empty |
| 2 | 368 | 0.56 | 0.75 | 46 | empty |
| 3 | 323 | 0.53 | 0.74 | 43 | empty |
| 4 | 146 | 0.39 | 0.73 | 25 | empty |
| 5 | 69 | 0.35 | 0.76 | 14 | empty |
Interfaces
1 interface between chains.
- A–C · 798 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32157
- Elsewhere: RCSB PDB 1O65 · PDBe 1O65 · UniProt P32157
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