Research workbench
Human prion protein fibril, M129 variant
Analyse Human prion protein fibril, M129 variant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UUR
- Type
- protein
- Length
- 400 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major prion protein
- UniProt
- P04156
Structure
electron microscopy · 1 distinct chain · 0% helix, 60% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J | Major prion protein | protein | 40 | 0% helix, 60% strand | P04156 |
Interfaces
17 interfaces between chains.
- A–E · 1569 Ų buried · 44 hydrogen bonds · protein-protein
- E–I · 1568 Ų buried · 44 hydrogen bonds · protein-protein
- A–D · 1566 Ų buried · 43 hydrogen bonds · protein-protein
- D–H · 1566 Ų buried · 42 hydrogen bonds · protein-protein
- F–J · 1565 Ų buried · 42 hydrogen bonds · protein-protein
Compared structures
- 6UUR · Human prion protein fibril, M129 variant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04156
- Elsewhere: RCSB PDB 6UUR · PDBe 6UUR · UniProt P04156
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