Research workbench
Crystal structure of the murine DHX36 helicase
Analyse Crystal structure of the murine DHX36 helicase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UP2
- Type
- protein
- Length
- 809 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DHX36 protein
- UniProt
- B2RQS6
- Ligands
- CL
- Pockets
- 12 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DHX36 protein | protein | 809 | 47% helix, 16% strand | B2RQS6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 901 | 0.85 | 0.87 | 105 | empty |
| 2 | 183 | 0.71 | 0.89 | 33 | empty |
| 3 | 82 | 0.64 | 0.91 | 21 | empty |
| 4 | 362 | 0.64 | 0.79 | 39 | empty |
| 5 | 105 | 0.57 | 0.85 | 28 | empty |
Compared structures
- 6UP2 · Crystal structure of the murine DHX36 helicase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2RQS6
- Elsewhere: RCSB PDB 6UP2 · PDBe 6UP2 · UniProt B2RQS6
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