Research workbench
HIV-1 wild-type reverse transcriptase-DNA complex with (-)-ftc-tp
Analyse HIV-1 wild-type reverse transcriptase-DNA complex with (-)-ftc-tp in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UJX
- Type
- protein + DNA
- Length
- 986 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04585
- Ligands
- 1RY, MG, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 548 | — | P04585 |
| B | — | protein | 398 | — | P04585 |
| P | — | dna | 18 | — | — |
| T | — | dna | 22 | — | — |
Ligands and binding sites
- 1RY · [[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate · ligand · chains A, P, T
- MG · Magnesium ion · metal · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A, B, P, T
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UJX · HIV-1 wild-type reverse transcriptase-DNA complex with (-)-FTC-TP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04585
- Elsewhere: RCSB PDB 6UJX · PDBe 6UJX · UniProt P04585
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