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Katanin hexamer in the ring conformation with resolved protomer one in complex with substrate

Analyse Katanin hexamer in the ring conformation with resolved protomer one in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6UGF
Type: protein
Length: 1,862 residues
Chains: 7
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P34808
Ligands: ATP, MG

Structure

electron microscopy · 7 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	304	—	P34808
B	—	protein	305	—	P34808
C	—	protein	308	—	P34808
D	—	protein	310	—	P34808
E	—	protein	312	—	P34808
F	—	protein	311	—	P34808
G	—	protein	12	—	—

Ligands and binding sites

ATP · Adenosine-5'-triphosphate · ligand · 5 copies · chains B, C, D, E, F
MG · Magnesium ion · metal · 4 copies · chains B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6UGF · Katanin hexamer in the ring conformation with resolved protomer one in complex with… · the same entry in another collection · chain G against G, TM-score 1.00
P34808 · AlphaFold monomer V2.0 prediction for meiotic spindle formation protein mei-1 (P34808) · a predicted model of the same protein · chain E against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P34808
Elsewhere: RCSB PDB 6UGF · PDBe 6UGF · UniProt P34808

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