Research workbench
Katanin hexamer in the ring conformation in complex with substrate
Analyse Katanin hexamer in the ring conformation in complex with substrate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UGE
- Type
- protein
- Length
- 1,862 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P34808
- Ligands
- ATP, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 304 | — | P34808 |
| B | — | protein | 305 | — | P34808 |
| C | — | protein | 308 | — | P34808 |
| D | — | protein | 310 | — | P34808 |
| E | — | protein | 312 | — | P34808 |
| F | — | protein | 311 | — | P34808 |
| G | — | protein | 12 | — | — |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 5 copies · chains B, C, D, E, F
- MG · Magnesium ion · metal · 4 copies · chains B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UGE · Katanin hexamer in the ring conformation in complex with substrate · the same entry in another collection · chain G against G, TM-score 1.00
- P34808 · AlphaFold monomer V2.0 prediction for meiotic spindle formation protein mei-1 (P34808) · a predicted model of the same protein · chain D against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34808
- Elsewhere: RCSB PDB 6UGE · PDBe 6UGE · UniProt P34808
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