Research workbench
B. theta bile salt hydrolase
Analyse B. theta bile salt hydrolase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UFY
- Type
- protein
- Length
- 1,307 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Choloylglycine hydrolase
- UniProt
- Q8A600
- Pockets
- 15 · best druggability 0.80
Structure
x-ray diffraction · 3 distinct chains · 20% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Choloylglycine hydrolase | protein | 326 | 20% helix, 31% strand | Q8A600 |
| B | Choloylglycine hydrolase | protein | 325 | 19% helix, 31% strand | Q8A600 |
| D, C | Choloylglycine hydrolase | protein | 328 | 20% helix, 31% strand | Q8A600 |
Pockets
15 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 150 | 0.80 | 0.96 | 27 | empty |
| 2 | 134 | 0.80 | 0.97 | 29 | empty |
| 3 | 144 | 0.80 | 0.96 | 28 | empty |
| 4 | 139 | 0.79 | 0.96 | 31 | empty |
| 5 | 204 | 0.62 | 0.82 | 30 | empty |
Interfaces
6 interfaces between chains.
- A–B · 1772 Ų buried · 26 hydrogen bonds · protein-protein
- D–C · 1767 Ų buried · 23 hydrogen bonds · protein-protein
- B–D · 597 Ų buried · 9 hydrogen bonds · protein-protein
- A–C · 557 Ų buried · 3 hydrogen bonds · protein-protein
- B–C · 226 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 6UFY · B. theta Bile Salt Hydrolase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A600
- Elsewhere: RCSB PDB 6UFY · PDBe 6UFY · UniProt Q8A600
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.