Research workbench
The crystal structure of staphylococcus aureus super antigen-like protein SSL10
Analyse The crystal structure of staphylococcus aureus super antigen-like protein SSL10 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UCD
- Type
- protein
- Length
- 347 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Exotoxin
- UniProt
- A0A0D6W7J6
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 2 distinct chains · 17% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exotoxin | protein | 174 | 17% helix, 36% strand | A0A0D6W7J6 |
| B | Exotoxin | protein | 173 | 17% helix, 36% strand | A0A0D6W7J6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 265 | 0.55 | 0.76 | 27 | empty |
| 2 | 281 | 0.55 | 0.76 | 26 | empty |
Interfaces
1 interface between chains.
- A–B · 168 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 6UCD · The crystal structure of Staphylococcus aureus super antigen-like protein SSL10 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0D6W7J6
- Elsewhere: RCSB PDB 6UCD · PDBe 6UCD · UniProt A0A0D6W7J6
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