Research workbench
Structure of human pacrg-MEIG1 complex (limited proteolysis)
Analyse Structure of human pacrg-MEIG1 complex (limited proteolysis) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UCC
- Type
- protein
- Length
- 253 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Parkin coregulated gene protein; Meiosis expressed gene 1 protein homolog
- UniProt
- Q96M98, Q5JSS6
- Ligands
- PO4
Structure
x-ray diffraction · 2 distinct chains · 53% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Parkin coregulated gene protein | protein | 169 | 66% helix, 2% strand | Q96M98 |
| B | Meiosis expressed gene 1 protein homolog | protein | 84 | 26% helix, 19% strand | Q5JSS6 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains B
- PEG · Di(hydroxyethyl)ether · additive · chains A, B
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 762 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 6UCC · Structure of human PACRG-MEIG1 complex (limited proteolysis) · the same entry in another collection · chain B against B, TM-score 1.00
- Q96M98 · AlphaFold monomer V2.0 prediction for parkin coregulated gene protein (Q96M98) · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q5JSS6 · AlphaFold monomer V2.0 prediction for meiosis expressed gene 1 protein homolog (Q5JSS6) · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96M98
- Every structure of UniProt Q5JSS6
- Elsewhere: RCSB PDB 6UCC · PDBe 6UCC · UniProt Q96M98 · UniProt Q5JSS6
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