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Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from cryptococcus neoformans (CNGH128_VII)

Analyse Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6UBC
Type: protein
Length: 256 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: GLYCO_HYDRO_CC domain-containing protein
UniProt: J9VNP7
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GLYCO_HYDRO_CC domain-containing protein	protein	256	38% helix, 19% strand	J9VNP7

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	222	0.52	0.77	40	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6UBC · Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt J9VNP7
Elsewhere: RCSB PDB 6UBC · PDBe 6UBC · UniProt J9VNP7

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