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Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from pseudomonas viridiflava (PVGH128_II)

Analyse Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6UAV
Type
protein
Length
259 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
GLYCO_HYDRO_CC domain-containing protein
UniProt
A0A1Y6JJH6
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGLYCO_HYDRO_CC domain-containing proteinprotein25937% helix, 17% strandA0A1Y6JJH6

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 3 copies · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6UAV · Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00

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