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Crystal structure of equine serum albumin complex with 6-mna
Analyse Crystal structure of equine serum albumin complex with 6-mna in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6U5A
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Serum albumin
- UniProt
- P35747
- Ligands
- PWY, UNX, SO4
- Pockets
- 8 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serum albumin | protein | 580 | 74% helix, 0% strand | P35747 |
Ligands and binding sites
- PWY · (6-methoxynaphthalen-2-yl)acetic acid · ligand · 3 copies · chains A
- UNX · Unknown atom or ion · ion · 7 copies · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 444 | 0.80 | 0.87 | 61 | UNX |
| 2 | 676 | 0.79 | 0.83 | 57 | UNX |
| 3 | 280 | 0.69 | 0.83 | 42 | PWY |
| 4 | 94 | 0.66 | 0.91 | 24 | empty |
| 5 | 204 | 0.59 | 0.80 | 21 | empty |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35747
- Elsewhere: RCSB PDB 6U5A · PDBe 6U5A · UniProt P35747
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