Research workbench
Structure of two-domain translational regulator YIH1 reveals a possible mechanism of action
Analyse Structure of two-domain translational regulator YIH1 reveals a possible… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6U1L
- Type
- protein
- Length
- 258 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein impact homolog
- UniProt
- P25637
- Pockets
- 3 · best druggability 0.71
Structure
solution nmr · 1 distinct chain · 33% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein impact homolog | protein | 258 | 33% helix, 20% strand | P25637 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.71 | 0.94 | 22 | empty |
| 2 | 196 | 0.50 | 0.76 | 27 | empty |
| 3 | 59 | 0.40 | 0.79 | 15 | empty |
Compared structures
- 6U1L · Structure of two-domain translational regulator Yih1 reveals a possible mechanism of… · the same entry in another collection · chain A against A, TM-score 1.00
- P25637 · AlphaFold monomer V2.0 prediction for protein impact homolog (P25637) · a predicted model of the same protein · chain A against A, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25637
- Elsewhere: RCSB PDB 6U1L · PDBe 6U1L · UniProt P25637
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