Research workbench
Chaetomium thermophilum udp-glucose glucosyl transferase (uggt) double cysteine mutant G177C/A786C.
Analyse Chaetomium thermophilum udp-glucose glucosyl transferase (uggt) double cysteine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6TS8
- Type
- protein
- Length
- 2,508 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Udp-glucose-glycoprotein glucosyltransferase-like protein
- UniProt
- G0SB58
- Pockets
- 20 · best druggability 0.84
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Udp-glucose-glycoprotein glucosyltransferase-like protein | protein | 1254 | 29% helix, 13% strand | G0SB58 |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1052 | 0.84 | 0.85 | 126 | empty |
| 2 | 763 | 0.82 | 0.85 | 85 | empty |
| 3 | 396 | 0.75 | 0.85 | 56 | empty |
| 4 | 84 | 0.74 | 0.96 | 28 | empty |
| 5 | 76 | 0.74 | 0.97 | 28 | empty |
Interfaces
1 interface between chains.
- A–B · 808 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 6TS8 · Chaetomium thermophilum UDP-Glucose Glucosyl Transferase (UGGT) double cysteine mutant… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0SB58
- Elsewhere: RCSB PDB 6TS8 · PDBe 6TS8 · UniProt G0SB58
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