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Solution structure of the RNase H domain of the HIV-1 reverse transcriptase in the presence of magnesium

Analyse Solution structure of the RNase H domain of the HIV-1 reverse transcriptase in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1O1W
Type: protein
Length: 138 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribonuclease H
EC: 3.1.26.4
UniProt: P04585
Pockets: 1 · best druggability 0.41

Structure

solution nmr · 1 distinct chain · 23% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribonuclease H (EC 3.1.26.4)	protein	138	23% helix, 21% strand	P04585

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	105	0.41	0.77	21	empty

Compared structures

1O1W · Solution structure of the RNase H domain of the HIV-1 reverse transcriptase in the… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P04585
Elsewhere: RCSB PDB 1O1W · PDBe 1O1W · UniProt P04585

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