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The crystal structure of the msp domain of human vap-a in complex with the phospho-ffat motif of STARD3.

Analyse The crystal structure of the msp domain of human vap-a in complex with the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6TQR
Type: protein
Length: 521 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9P0L0, Q14849
Ligands: CL

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	—	protein	126	—	Q9P0L0
E	—	protein	10	—	Q14849
F	—	protein	7	—	Q14849

Ligands and binding sites

CL · Chloride ion · ion · 7 copies · chains A, B, C, D, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6TQR · The crystal structure of the MSP domain of human VAP-A in complex with the Phospho-FFAT… · the same entry in another collection · chain F against F, TM-score 1.00
Q9P0L0 · AlphaFold monomer V2.0 prediction for vesicle-associated membrane protein-associated… · a predicted model of the same protein · chain A against A, TM-score 0.97
Q14849 · AlphaFold monomer V2.0 prediction for star-related lipid transfer protein 3 (Q14849) · a predicted model of the same protein · chain F against A, TM-score 0.71

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9P0L0
Every structure of UniProt Q14849
Elsewhere: RCSB PDB 6TQR · PDBe 6TQR · UniProt Q9P0L0 · UniProt Q14849

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