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Crystal structure of the C14 ring of the F1FO ATP synthase from spinach chloroplast

Analyse Crystal structure of the C14 ring of the F1FO ATP synthase from spinach… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6TQJ
Type
protein
Length
1,134 residues
Chains
14
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
ATP synthase subunit C, chloroplastic
UniProt
P69447
Ligands
LFA

Structure

x-ray diffraction · 1 distinct chain · 89% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D, E, F, G, H, I, J, K, L, M, NATP synthase subunit C, chloroplasticprotein8189% helix, 0% strandP69447

Ligands and binding sites

  • LFA · Eicosane · ligand · 26 copies · chains A, B, N, C, D, E, F, G, H, I, J, K, L, M
  • OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · chains H, I

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

14 interfaces between chains.

  • C–D · 1834 Ų buried · 9 hydrogen bonds · protein-protein
  • F–G · 1821 Ų buried · 11 hydrogen bonds · protein-protein
  • G–H · 1809 Ų buried · 10 hydrogen bonds · protein-protein
  • K–L · 1806 Ų buried · 9 hydrogen bonds · protein-protein
  • B–C · 1803 Ų buried · 9 hydrogen bonds · protein-protein

Compared structures

  • 6TQJ · Crystal structure of the c14 ring of the F1FO ATP synthase from spinach chloroplast · the same entry in another collection · chain K against K, TM-score 1.00

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