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Structure of a protein-RNA complex by ssnmr

Analyse Structure of a protein-RNA complex by ssnmr in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6TPH
Type: protein + RNA
Length: 144 residues
Chains: 2
Method: solid-state nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 50S ribosomal protein L7AE; RNA (26-mer)
UniProt: Q8U160

Structure

solid-state nmr · 2 distinct chains · 48% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L7AE	protein	121	48% helix, 16% strand	Q8U160
B	RNA (26-mer)	rna	23	—	—

Interfaces

1 interface between chains.

A–B · 612 Å² buried · 27 hydrogen bonds · protein-nucleic

Compared structures

6TPH · Structure of a protein-RNA complex by ssNMR · the same entry in another collection · chain A against A, TM-score 1.00
Q8U160 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L7AE (Q8U160) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8U160
Elsewhere: RCSB PDB 6TPH · PDBe 6TPH · UniProt Q8U160

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