Research workbench
Crystal structure of vim-2 in complex with triazole-based inhibitor OP24
Analyse Crystal structure of vim-2 in complex with triazole-based inhibitor OP24 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6TGI
- Type
- protein
- Length
- 463 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A485HTJ5
- Ligands
- N8Z, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 231 | — | A0A485HTJ5 |
| B | — | protein | 232 | — | A0A485HTJ5 |
Ligands and binding sites
- N8Z · 5-(4-chloranyl-1,5-dimethyl-pyrazol-3-yl)-4-ethyl-1,2, 4-triazole-3-thiol · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 6 copies · chains A, B
- FMT · Formic acid · additive · 8 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TGI · Crystal structure of VIM-2 in complex with triazole-based inhibitor OP24 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A485HTJ5
- Elsewhere: RCSB PDB 6TGI · PDBe 6TGI · UniProt A0A485HTJ5
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