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Crystal structure of the omalizumab scfv

Analyse Crystal structure of the omalizumab scfv in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6TCS
Type
protein
Length
232 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Omalizumab scfv

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 51% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AOmalizumab scfvprotein2325% helix, 51% strand—

Ligands and binding sites

  • PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 6TCS · Crystal structure of the omalizumab scFv · the same entry in another collection · chain A against A, TM-score 1.00

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