Research workbench
Guanine-rich oligonucleotide with 5'- and 3'-gc ends form G-quadruplex with A(GGGG)A hexad, gcgc- and G-quartets and two symmetric gg and aa base pair
Analyse Guanine-rich oligonucleotide with 5'- and 3'-gc ends form G-quadruplex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6SYK
- Type
- DNA
- Length
- 28 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gcncg
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Gcncg | dna | 14 | — | — |
Interfaces
1 interface between chains.
- A–B · 772 Ų buried · 70 hydrogen bonds · nucleic-nucleic
Compared structures
- 6SYK · Guanine-rich oligonucleotide with 5'- and 3'-GC ends form G-quadruplex with A(GGGG)A… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6SYK · PDBe 6SYK
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