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Edn mutant L45H

Analyse Edn mutant L45H in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6SSO
Type
protein
Length
135 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Non-secretory ribonuclease
EC
4.6.1.18
UniProt
P10153
Pockets
1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 34% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANon-secretory ribonuclease (EC 4.6.1.18)protein13524% helix, 34% strandP10153

Ligands and binding sites

  • ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11080.360.7418empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 6SSO · EDN mutant L45H · the same entry in another collection · chain A against A, TM-score 1.00
  • P10153 · AlphaFold monomer V2.0 prediction for non-secretory ribonuclease (P10153) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

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