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Crystal structure of human prolidase G448R variant expressed in the presence of chaperones

Analyse Crystal structure of human prolidase G448R variant expressed in the presence of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6SRG
Type
protein
Length
927 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P12955
Ligands
MN, OH

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein457—P12955
B—protein470—P12955

Ligands and binding sites

  • MN · Manganese (II) ion · metal · 4 copies · chains A, B
  • OH · Hydroxide ion · ion · 2 copies · chains A, B
  • GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6SRG · Crystal Structure of Human Prolidase G448R variant expressed in the presence of chaperones · the same entry in another collection · chain A against A, TM-score 1.00
  • P12955 · AlphaFold monomer V2.0 prediction for xaa-pro dipeptidase (P12955) · a predicted model of the same protein · chain A against A, TM-score 0.99

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