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Mouse RBM20 rrm domain in complex with aucuua RNA

Analyse Mouse RBM20 rrm domain in complex with aucuua RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6SO9
Type: protein + RNA
Length: 118 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Aucuua; RNA-binding protein 20
UniProt: Q3UQS8

Structure

solution nmr · 2 distinct chains · 30% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Aucuua	rna	6	—	—
A	RNA-binding protein 20	protein	112	30% helix, 24% strand	Q3UQS8

Interfaces

1 interface between chains.

B–A · 884 Å² buried · 25 hydrogen bonds · protein-nucleic

Modifications

Observed in the structure: 1 modified (nucleotide modification).

Compared structures

6SO9 · Mouse RBM20 RRM domain in complex with AUCUUA RNA · the same entry in another collection · chain B against B, TM-score 1.00
Q3UQS8 · AlphaFold monomer V2.0 prediction for RNA-binding protein 20 (Q3UQS8) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3UQS8
Elsewhere: RCSB PDB 6SO9 · PDBe 6SO9 · UniProt Q3UQS8

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