Research workbench
The delta calcium mutant of alpha-actinin from entamoeba histolytica
Analyse The delta calcium mutant of alpha-actinin from entamoeba histolytica in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6SL7
- Type
- protein
- Length
- 618 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calponin homology domain protein putative
- UniProt
- C4LWU6
- Pockets
- 5 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 70% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calponin homology domain protein putative | protein | 618 | 70% helix, 1% strand | C4LWU6 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.69 | 0.92 | 18 | empty |
| 2 | 93 | 0.47 | 0.80 | 17 | empty |
| 3 | 139 | 0.44 | 0.76 | 21 | empty |
| 4 | 57 | 0.35 | 0.77 | 13 | empty |
| 5 | 76 | 0.33 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide, 1 modified (disulfide, methylation).
Compared structures
- 6SL7 · The Delta Calcium mutant of ALPHA-ACTININ FROM ENTAMOEBA HISTOLYTICA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4LWU6
- Elsewhere: RCSB PDB 6SL7 · PDBe 6SL7 · UniProt C4LWU6
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