Research workbench
Structure of the curli secretion-assembly complex CSGG:CSGF
Analyse Structure of the curli secretion-assembly complex CSGG:CSGF in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6SI7
- Type
- protein
- Length
- 2,502 residues
- Chains
- 18
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Curli production ASSEMBLY/TRANSPORT component csgf; Curli production ASSEMBLY/TRANSPORT…
- UniProt
- P0AE98, P0AEA2
- Pockets
- 20 · best druggability 0.80
Structure
electron microscopy · 2 distinct chains · 24% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I | Curli production ASSEMBLY/TRANSPORT component csgf | protein | 35 | 37% helix, 0% strand | P0AE98 |
| P, J, K, L, M, N, O, Q, R | Curli production ASSEMBLY/TRANSPORT component csgg | protein | 243 | 22% helix, 36% strand | P0AEA2 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 688 | 0.80 | 0.85 | 96 | empty |
| 2 | 791 | 0.68 | 0.75 | 72 | empty |
| 3 | 165 | 0.63 | 0.85 | 25 | empty |
| 4 | 187 | 0.63 | 0.84 | 28 | empty |
| 5 | 160 | 0.63 | 0.85 | 30 | empty |
Interfaces
45 interfaces between chains.
- N–O · 3030 Ų buried · 62 hydrogen bonds · protein-protein
- P–J · 3029 Ų buried · 62 hydrogen bonds · protein-protein
- L–M · 3027 Ų buried · 62 hydrogen bonds · protein-protein
- P–R · 3026 Ų buried · 62 hydrogen bonds · protein-protein
- M–N · 3026 Ų buried · 62 hydrogen bonds · protein-protein
Compared structures
- 6SI7 · Structure of the curli secretion-assembly complex CsgG:CsgF · the same entry in another collection · chain M against M, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AE98
- Every structure of UniProt P0AEA2
- Elsewhere: RCSB PDB 6SI7 · PDBe 6SI7 · UniProt P0AE98 · UniProt P0AEA2
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