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Elongation factor P from corynebacterium glutamicum

Analyse Elongation factor P from corynebacterium glutamicum in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6S8Z
Type: protein
Length: 185 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Elongation factor P
UniProt: A0A1B4WLR4
Ligands: NA
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Elongation factor P	protein	185	5% helix, 52% strand	A0A1B4WLR4

Ligands and binding sites

NA · Sodium ion · metal · chains A
ACT · Acetate ion · additive · 3 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	108	0.36	0.73	24	empty

Compared structures

6S8Z · Elongation Factor P from Corynebacterium glutamicum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1B4WLR4
Elsewhere: RCSB PDB 6S8Z · PDBe 6S8Z · UniProt A0A1B4WLR4

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