Research workbench

Bat circovirus without DNA vlp

Analyse Bat circovirus without DNA vlp in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6RPO
Type: protein
Length: 201 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bat circovirus capsid protein
Pockets: 1 · best druggability 0.58

Structure

electron microscopy · 1 distinct chain · 7% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
u	Bat circovirus capsid protein	protein	201	7% helix, 41% strand	—

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.58	0.88	20	empty

Compared structures

6RPO · bat circovirus without DNA VLP · the same entry in another collection · chain u against u, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6RPO · PDBe 6RPO

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