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X-ray structure of human relaxin at 1.5 ångströms. comparison to insulin and implications for receptor binding determinants

Analyse X-ray structure of human relaxin at 1.5 ångströms. comparison to insulin and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6RLX
Type
protein
Length
100 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Relaxin, a-chain; Relaxin, B-chain
UniProt
P04090

Structure

x-ray diffraction · 3 distinct chains · 66% helix, 8% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, CRelaxin, a-chainprotein2467% helix, 8% strandP04090
BRelaxin, B-chainprotein2763% helix, 7% strandP04090
DRelaxin, B-chainprotein2568% helix, 8% strandP04090

Interfaces

6 interfaces between chains.

  • A–B · 718 Ų buried · 15 hydrogen bonds · protein-protein
  • C–D · 707 Ų buried · 15 hydrogen bonds · protein-protein
  • B–C · 242 Ų buried · 6 hydrogen bonds · protein-protein
  • A–C · 237 Ų buried · 1 hydrogen bond · protein-protein
  • A–D · 214 Ų buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide, 2 modified (disulfide, cyclization).

Compared structures

  • 6RLX · X-ray structure of human relaxin at 1.5 ångströms. comparison to insulin and implications… · the same entry in another collection · chain A against A, TM-score 1.00
  • P04090 · AlphaFold monomer V2.0 prediction for prorelaxin H2 (P04090) · a predicted model of the same protein · chain D against A, TM-score 0.87

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