Research workbench
Pfac keto synthase-chain length factor
Analyse Pfac keto synthase-chain length factor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6RIW
- Type
- protein
- Length
- 923 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ORF10
- UniProt
- Q9RA19
- Ligands
- MG
- Pockets
- 8 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ORF10 | protein | 923 | 40% helix, 20% strand | Q9RA19 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.73 | 0.98 | 17 | empty |
| 2 | 231 | 0.62 | 0.81 | 30 | empty |
| 3 | 148 | 0.61 | 0.84 | 27 | empty |
| 4 | 265 | 0.56 | 0.78 | 41 | empty |
| 5 | 129 | 0.54 | 0.82 | 21 | empty |
Compared structures
- 6RIW · PfaC Keto synthase-Chain length factor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RA19
- Elsewhere: RCSB PDB 6RIW · PDBe 6RIW · UniProt Q9RA19
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